The Soybean Metabolome Repository (SoyMR) is a database that published data from comprehensive analysis (untargeted metabolome analysis) of small compounds using liquid chromatography-mass spectrometry (LC-MS) on leaves of soybean accessions provided by the World Soybean Core Collection.
The samples
We analyzed the leaves of 79 soybean accessions that were successfully grown out of 80 accessions provided by the World Soybean Core Collection (The Research Center of Genetic Resources, National Agriculture and Food Research Organization, NARO). The accessions numbered GmWMC 011, 018, 024, 159, 163, 176, and 183 were sampled twice, while the remaining strains were sampled once, yielding a total of 86 samples were analyzed.
- See the Sample list for the sample details.
- See the Method section of the Help page for the details of analytical methods
- The untargeted metabolome data were also available on the Download page.
mGWAS database
We conducted metabolite-genome-wide association analysis (mGWAS) using untargeted metabolome data and genome information obtained from each accession, and the results were compiled in the database, mGWAS Search. The database would help the users to construct working hypotheses for discovering novel metabolite-to-gene relationships.
Citation
Please cite the article below about the Soybean Metabolome Repository.
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- It is not guaranteed that the compounds listed for the peak are present in the sample.
- It is not guaranteed that the compounds not listed for the peak are absent in the sample.
Related website
| Thing Metabolome Repository | |
| Food Metabolome Repository | |
| Plant Metabolome Repository |
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